RStudio OnDemand

RStudio Interactive App on OnDemand

• Login to the HPC cluster either by Command Line or the OnDemand Website. For information on how to log into the cluster check out:

Navigate To The Cluster

• Go to "Interactive Apps" tab
• Select "RStudio"

• Select the:

  • the time needed on the app
  • number of cores
  • CPU memory you need
  • the version of R you wish to run.

  • the modules needed for your pacakges to run

    • typically the following are sufficient:

    boost/1.63.0-python3 java/1.8.0_60 gsl/2.6
    

Note

• Each user can only start one OnDemand RStudio session on one compute node at a time. If you need to start multiple RStudio sessions, please make sure you select a different nodename from your current running session.

• Click "Launch"
• Click on "Connect to RStudio"

• When you are finished:

  • exit RStudio properly q()
  • close the RStudio tab
  • Go back to the main OnDemand page
  • Click "Delete" to end the session